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Pi1-1C

7b. 7a. 6b. 6a. 5a. 5a. M1 Nip. K1 C101LAC M1. M1 Nip. K1 C101LAC M1. M1 Nip. K1 C101LAC M1. M1 Nip. K1 C101LAC M1. M1 Nip. K1 C101LAC M2. M1 Nip. K1 C101LAC M1.

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Pi1-1C

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  1. 7b 7a 6b 6a 5a 5a M1 Nip. K1 C101LAC M1 M1 Nip. K1 C101LAC M1 M1 Nip. K1 C101LAC M1 M1 Nip. K1 C101LAC M1 M1 Nip. K1 C101LAC M2 M1 Nip. K1 C101LAC M1 70 kb deletion region in the N type genome (cv. Nipponbare) 7b c 6b 5b 7a 6a 5a 5 kb Pi1-1C Pi1-3C Pi1-4C Pi1-2C gap d Pi1-1C Pi1-2C Pi1-34C Fig. S1. Presence/absence analysis of two sets of candidate genes in the cv. Nipponbare (N) and cv. C101LAC (K) genomes. a The locations of the four candidate genes in the 127kb deletion region of the cv. C101LAC type genome, and c of the four candidate genes in the 70kb deletion region of the cv. Nipponbare genome (see Fig. 2). The solid arrows indicate the location of the candidate genes, and the dashed arrows above each gene the amplified region. b, d Amplicon profiles following separation by agarose gel electrophoresis. Cultivars K1 and C101LAC, respectively, were chosen as the susceptible and resistant parent of the mapping population, and cv. Nipponbare (Nip) represented a reference. M1, DL15,000; M2, DL2,000.

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