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June 10 th , 2003 Presentation by Jeong-Hun Shin

Databases and the Grid by Paul Watson University of Newcastle Grid Computing: Making the Global Infrastructure a Reality. June 10 th , 2003 Presentation by Jeong-Hun Shin. Contact. Contact (1997) directed by Robert Zemeckis story by Carl Sagan. Ancestors said that.

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June 10 th , 2003 Presentation by Jeong-Hun Shin

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  1. Databases and the GridbyPaul WatsonUniversity of NewcastleGrid Computing: Making the Global Infrastructure a Reality June 10th, 2003Presentation byJeong-Hun Shin

  2. Contact Contact (1997) directed by Robert Zemeckis story byCarl Sagan

  3. Ancestors said that

  4. SETI@homeThe Search for ExtraTerrestrial Intelligence http://setiathome.ssl.berkeley.edu/

  5. Folding@hometo understand protein folding, protein aggregation, and related diseases

  6. Contents • Integration of databases into the Grid • Database requirements of Grid applications • Requirements above existing systems • The Grid and databases: the current state • Integrating databases across the Grid • Federating database systems across the Grid

  7. Integration of databases into the Grid • The Grid • Publication of data in a more open manner • New results from separate, distributed sources • If the Grid is to support a wider range of applications • e.g., applications in the life/earth sciences, business applications • Difficulties in integrating databases into the Grid • Two main dimensions of complexity • Differences between server products within a database paradigm • Variety of database paradigms • Tradeoff: generic middleware for federating Grid-enabled DBs • Full functionality of different database paradigms • Common solutions to reduce effort

  8. How can DB’s be integrated into the Grid? • How to integrate existing DBMS’s into the Grid? • Short-term solution: holding limitations • cf. Long-term solution • Developments to the Grid middleware and DB server components • Three main questions • What are the requirements of Grid-enabled databases? • How far do existing Grid middleware and database servers go towards meeting these requirements? • How might the requirements be more fully met?

  9. DB requirements of Grid applications • Prerequisite • Requires the functionality provided by current DBMS • query, update, indexing, transaction, recovery, replication, security, … • Grid-enabled DBMS from scratch is not desirable. • New facilities are added by enhancing existing DBMS. • The most commonly used DBMS are commercial: not open-source  Enhancement by external wrapping of the DBMS • Two categories of requirements • Generic across all Grid application components • Database specific

  10. Requirements above existing systems • Scalability • Extremely demanding performance and capacity • Low response times for complex queries • Support for high access throughput • Handling unpredictable usage • Difficulty in predicting the types of accesses • Current DBMS: • Little support for controlling the sharing of finite resources

  11. Requirements (cont’d) • Metadata-driven access • Current use: relatively simple As the Grid expands into new applications: • more sophisticated metadata systems and tools  Semantic Grid • Two-step access to data • Search of metadata catalogs to locate the DB’s  Data access • Need for a standardized interface for all DBS • Multiple database federation • Open publication of data  Advances in applications combining info from multiple data sets • Federation middleware w/ standardized interface • Higher-level problem of the semantic integration of multiple DB’s

  12. The Grid and databases: the current state • Globus • The dominant middleware used for building computational grids • Monitoring and Discovery Service (MDS): Grid information service • Globus Resource Allocation Manager (GRAM): resource management • Grid Security Infrastructure (GSI) • Limitations and possibilities • No direct support for database integration • GSI can provide a single sign-on capability • GridFTP can be used for bulk database loading/bulk transfer of query results • MDS and GRAM can be used to locate and run DB federation middleware

  13. Metadata DBS Query Transaction DBMS Notification Bulk loading Scheduling Accounting Integrating databases into the Grid • Service-based framework • Individual operations offered by the services would be standardized • Standardization would be done by adding wrapper code to mapthe service operation interface to the vendor specific interface • Advantage: each DBS can provide a metadata service • Information on the range of services and operations • DBS with a Grid-enabled service interface Client Service Interfaceonto the Grid Services Interface code

  14. Roles of service wrapper • Metadata • Access to technical metadata about the DBS and the set of services • e.g., logical/physical name of the DBS and contents, ownership, ver., … • Query • Various DBMS  definition of type and level of query language • Transaction • Transactions involving only a single DBS • Allows a DBS to participate in app-wide distributed transactions • Bulk loading • For large amounts of data: optimized for transfer of large datasets

  15. Roles of service wrapper (cont’d) • Notification • Allows clients to register some interest in a set of data • Receives a message when a change occurred • Scheduling • Allows users to schedule the use of the DBS • Accounting • Information for accounting and payment scheme • Monitors performance against agreed service levels • Enables users to be charged for resource usage

  16. Metadata Metadata DBS DBS Query Query Transaction Transaction Notification Notification Bulk loading Bulk loading Scheduling Scheduling Accounting Accounting Federating DBS across the Grid • Grid application interfacing directly to a set of DBS • Great application complexity • Duplication of effort Client

  17. Metadata Metadata DBS DBS Query Query Transaction Transaction Notification Notification Bulk loading Bulk loading Scheduling Scheduling Accounting Accounting Metadata Query Transaction Notification Bulk loading Scheduling Accounting Federating DBS across the Grid (cont’d) • Virtual database system on the Grid • Reduces to federating each of the individual services • Same interface as the DBS w/ Grid-enabled service interface • Possibility for federating services of both “real” DBS and Virtual DBS Client Service Interfaceonto the Grid Service Federation Middleware Virtual DBS

  18. Creation of Virtual DBS • Types of the creation of a Virtual DBS • A user decides to create a Virtual DBS • Services take a set of DBS and create a Virtual DBS • Challenge • Full standardization of all services is impossible • The resulting heterogeneity causes problems • Automatic creation of a Virtual DBS • The tool queries the metadata service their functionality and interface • Integration of the service is impossible if no options are available • Service federation middleware • Complexity varies from service to service • In general, increases along the degree of heterogeneity of the service

  19. Summary • A set of requirements for Grid databases • Existing Grid middleware does not meet them • A set of services should be offered by a Grid-integrated DBS • Service-based approach • Independent of any particular implementation technology • Simplifies the task of writing applicationsthat need to combine information from more than one DBS • Virtual DBS • Federating DBS across the Grid

  20. Thank you for your attention!

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