'Domain structure' presentation slideshows

PROTEIN PATTERN DATABASES

PROTEIN PATTERN DATABASES. PROTEIN SEQUENCES. SUPERFAMILY. FAMILY. DOMAIN. MOTIF. SITE. RESIDUE. BASIC INFORMATION COMES FROM SEQUENCE. Multiple alignments of related sequences- can build up consensus sequences of known families, domains, motifs or sites. Pattern Matrix Profile HMM.

2.94k views • 88 slides

Methods for comparing protein structures Protein structural classifications

Comparing and Classifying Domain Structures. Methods for comparing protein structures Protein structural classifications How do structures and functions diverge in protein superfamilies What proportion of genome sequences can be predicted to belong to superfamilies of known structure?.

498 views • 49 slides

Sequence control of Aggregation

Sequence control of Aggregation. Some Examples. Domain Swapping. Domain Swapping of RNase A. Yanshun & Eisenberg (2002) Protein Sci. 6:1285-1299. Loop-Sheet Insertion. Loop-sheet Insertion of a 1-Antitrypsin. Carrell, et al. (1998) Curr. Opin. Struct. Biol. 8:799-809. Inactive

226 views • 14 slides

Introduction

Introduction. Introductions. Name Company Affiliation Title/Function Job Responsibility Programming, Networking, Database Experience Experience Expectations for this Course. Course Materials. Name Card Student Workbook Student Materials Compact Disc Course Evaluation. Prerequisites.

163 views • 8 slides

Auto molecular replacement

Auto molecular replacement. Automatic molecular replacement. Basic philosophy: Users are very clever but they do not have sufficient time to try all parameters Procedures must use only existing data (reflection file, sequence/name of protein) and make decision using them.

68 views • 6 slides

Objective

Figure 1. Structure of the final 4-domain patient survey. Table 1. Structure of the final 8-domain healthcare team survey as emerged from analyses. For more information or questions, please contact: Dr. Daren Anderson Daren@chc1.com

146 views • 1 slides

University of Wisconsin-Madison NSEC: Templated Synthesis and Assembly at the Nanoscale

97 views • 1 slides