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Periodic markov chain - PowerPoint PPT Presentation

Markov Chains

Markov Chains. Dependencies along the genome. In previous classes we assumed every letter in a sequence is sampled randomly from some distribution q( ? ) over the alpha bet {A,C,T,G}. This model could suffice for alignment scoring, but it is not the case in true genomes.

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Periodic markov chain - PowerPoint PPT Presentation

Markov Chains