'Seq 1' presentation slideshows

R basics workshop

R basics workshop. Sohee Kang Assistant Professor , Teaching Stream , PhD soheekang@utsc.utoronto.ca. Math and Stats Learning Centre Department of Computer and Mathematical Sciences. Objective.

703 views • 70 slides

Proteome Analyst

Proteome Analyst. Transparent High-throughput Protein Annotation: Function, Localization and Custom Predictors. Proteome Analyst. Duane Szafron, Paul Lu, Russell Greiner, David Wishart, Zhiyong Lu, Brett Poulin, Roman Eisner, John Anvik,Cam Macdonell. Proteome Analyst. Proteome

903 views • 58 slides

R for Macroecology

520 views • 51 slides

Sequence analysis of nucleic acids and proteins: part 1

Sequence analysis of nucleic acids and proteins: part 1. Similarity search. Based on Chapter 3 of Post-genome Bioinformatics by Minoru Kanehisa, Oxford University Press, 2000. Search and learning problems in sequence analysis.

620 views • 48 slides

R basics workshop Part 3: Objects

595 views • 47 slides

R basics workshop

550 views • 42 slides

Recap

Recap. 3 different types of comparisons Whole genome comparison Gene search Motif discovery (shared pattern discovery). Agenda. More about Shared Pattern Discovery Edit Distance Recap What you need to know for the next quiz Alignment More details More examples.

426 views • 42 slides

Lesson 3 Database Similarity Search

Lesson 3 Database Similarity Search. Sequence Similarity search is a key to discover new functions. Basic assumption. Similar sequences. Similar function. WHY?. Have the required properties to undertake the function Come from the same origin. new sequence. ?. Similar function. ?.

360 views • 35 slides

Parallelized Multiple Sequence Alignment on the Public Cloud

Parallelized Multiple Sequence Alignment on the Public Cloud. Presented by: Dr. G.Sudha Sadasivam Professor, Dept of CSE, PSG College of Technology, Coimbatore. Co-authors Mr B. Vijayan, Mr S. Arul Prakash, Mr K.V. Hari Babu Students, BE(CSE), Dept of CSE, PSG College of Technology,

414 views • 31 slides

Statistical Genomics

Statistical Genomics. Lecture 12: Population structure. Zhiwu Zhang Washington State University. Administration. Homework 3 due Mar 2, Wednesday, 3:10PM Midterm exam: February 26, Friday, 50 minutes ( 3:35-4:25PM), 25 questions.

315 views • 31 slides

Statistical Genomics

Statistical Genomics. Lecture 11: Power, type I error and FDR. Zhiwu Zhang Washington State University. Administration. Homework 2, due Feb 17, Wednesday, 3:10P Homework 3 posted, due Mar 2, Wednesday, 3:10PM Midterm exam: February 26, Friday, 50 minutes ( 3:35-4:25PM), 25 questions.

276 views • 26 slides

Sequence analysis of nucleic acids and proteins: part 1

Sequence analysis of nucleic acids and proteins: part 1. Similarity search Lecture by Terry Speed. Based on Chapter 3 of Post-genome Bioinformatics by Minoru Kanehisa, Oxford University Press, 2000.

557 views • 25 slides

IETF 70 Vancouver, Canada

A Basic IVR Control Package for SIP Chris Boulton, Tim Melanchuk, Scott McGlashan draft-boulton-ivr-control-package-05. IETF 70 Vancouver, Canada. Overview. First version released in December 2005 Version 05 released November 2007 Control package providing basic IVR functionality

323 views • 17 slides

IETF 70 Vancouver, Canada

A Basic IVR Control Package for SIP Chris Boulton, Tim Melanchuk, Scott McGlashan draft-boulton-ivr-control-package-05. IETF 70 Vancouver, Canada. Overview. First version released in December 2005 Version 05 released November 2007 Control package providing basic IVR functionality

283 views • 17 slides

Power Analysis

277 views • 16 slides

Introduction to R

Introduction to R. A. Di Bucchianico. Types of statistical software. command-line software requires knowledge of syntax of commands reproducible results through scripts detailed analyses possible GUI-based software does not require knowledge of commands not reproducible actions

751 views • 15 slides

Roger Barlow HEP Computing seminar 21 st February 2008

290 views • 15 slides

Project: IEEE P802.15 Working Group for Wireless Personal Area Networks (WPANs)

Project: IEEE P802.15 Working Group for Wireless Personal Area Networks (WPANs) Submission Title: Proposal for merging mode H and mode L of AFH Date Submitted: August 6, 2001 Source: (1) HK Chen, YC Maa, and KC Chen (2) Anuj Batra, Kofi Anim-Appiah, and Jin-Meng Ho

236 views • 13 slides

Which BLAST?

Which BLAST?. Program Input Database blastn nt nt blastp aa aa blastx nt aa tblastn aa nt tblastx nt nt. Seq 1 Seq 2 Seq 3 Seq 4. Seq 1 ATATGATTAG Seq 2 ATATCCTTAG Seq 3 ATAGCCCTAG Seq 4 GGAGCCCTAG. ?. Phylip Paup

215 views • 5 slides

WHERE IS ENGLISH SPOKEN?

345 views • 4 slides