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Conformation of polymers

Conformation = stereostructure of the molecule defined by its sequence of bonds and torsion angles. Conformation of polymers. Examples of different random coil conformations. Polymer coil size. Gaussian coil. 1) Average of end-to-end distance (mean square end-to-end distance).

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Conformation of polymers

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  1. Conformation = stereostructure of the molecule defined by its sequence of bonds and torsion angles Conformation of polymers Examples of different random coil conformations

  2. Polymer coil size Gaussian coil 1) Average of end-to-end distance (mean square end-to-end distance) Note: if the Contour lenght of the chain is L maximum of rmax = L. denotes the average calculated from a large number of conformations 2) Radius of gyration Rg Root mean square distance of the collection of atoms from their common centre of gravity is the vector from the centre of the gravity to atom i Mean square end-to-end distance and Radius of gyration Rg are related

  3. The essential message … a) Polymer chains tend to retract to coils (unless there exist opposing factors..) and the chain conformation can be characterized as a random coil (solution, polymer melt and also glassy amorphous state) The polymer chain size can be evaluated based on average end-to-end distance r and radius of gyration Rg . b) Individual polymer chains can be studied as dissolved in solvents. Unperturbed state is characterized by the absence of long-range interactions (q-solvent) c) Models for polymer chain dimensions are developed. Mean square of end-to-end distance scales like C = 1 freely jointed chain C 2 freely rotating chain C  3.4 hindered rotation C  6.7 Advanced models (statistical weight matrices) Experimental value for polyethylene  6.7 C 4 – 10 Experiments for different polymers

  4. Different conformations Example 1: individual C-C bonds, simplest case ethane CH3-CH3 Both end form tetrahedrons. What is the relative orientation of these two tetrahedrions ?

  5. Example 2: n-butane 4 carbons Trans-conformation All carbon atoms in the same plane Gauche-conformation G G’

  6. Example 3: pentane 5 carbons 9 potential combination: but only six are independent TG = GT, TG ’= G’T, and GG’ = G’G In general Conformations… if the polymer have 10 000 carbons thus (number of distingguishable conformations is less due to symmetry and also some comformations have low probability e.g. GG’) Statistical treatment: Flory: Rotation isomeric state approximation. Each repeat unit can only be in T, G, or G’. Fluctuations around minima are ignores

  7. Models for polymers We have demostrated that the allowed conformations of the consequtive C-C bonds are T, G, G’.  We can start constructing chains just by taking random orders of T, G, G’ {TTGGTG’T….} = polymer chain conformation Random coil model ideal ”phantom” chain But long range interactions.. Polymer chain tends to revisit a spatial point that is already occupied.  We have to take also account the chain segments that are ”far apart” - long range interactions. Self avoiding walks – more open coils

  8. Dilute solutions • Individual polymer chains • We want to eliminate interactions between the polymer chains • Analogy with the idal gas model: ideal gas = no interactions between the gas molecules - real gas (interactions: repulsion and attractions) Gas: Low concentration: No interactions – like ideal gas High concentration: Interaction between the molecules ”real gas” Polymer solutions: High concentration: Entanglemets etc.. Low concentration – no interaction between the different chains But: In low concentration there is still internal interactions within the single polymer chain and interactions with the solvent molecules...

  9. Low concentration 1% polystyre 99% cyklohexane Example Good solvent (T > 35 oC) ”open coil” Rglarge But if solvent is changed to ethanol, which is ”bad” solvent for polystyrene  ”compact coil’’  Rg small In general: ”Bad” solvent ”compact coil” Good solvent ”open coil” ”extended coil” q-solvent Polymer-polymer and polymer-solvent interactions compensate each others... polymer-polymer 1) interaction >> polymer-solvent 2) interaction polymer-polymer 1) interaction << polymer-solvent 2) interaction

  10. q-Temperature Polymer solubility depents typically also on Temperature .. In general solubility is better in high Temperatures (typical case but not always..) One can define for polymer-solvent system q-Temperature T < q-Temperature ”compact coil” T > q-Temperature ”open coil” ”extended coil” T = q-Temperature ”in between” where Polymer-polymer and polymer-solvent interactions compensate each others Compare ideal gas Boyle-Temperature where attractive interaction between the gas molecules are equal to repulsive ”hard core” interactions. In this temperature gas molecules behave like ideal gas

  11. Models for statistical chains General model: Assume that the each mainchain bond (or repeat unit) in the polymer is a vectore segment ri ri Chain consist of these segments: n = total number of segments l = lenght of each segment vector: magnitude and direction End-to-end vector: Vector magnitude Remember: where q is the angle between vectors

  12. Average value of <r2> Take large ensemble of different conformations … mean square end-to-end distance and end-to-end distance This result is still a general formulation and is valid for any continuos polymer chain. (Unperturbed phantom chains, q-solvents and also polymer melt)

  13. 1) The freely jointed chain The freely jointed chain consist of a chain of bonds: the orientation of the different bonds is completely uncorrelated and no direction is preferred. i.e. bond angle t [0, 180] and torsion angle f [0, 360] can have any value There is no correlation between the segments: angle between the two bond vector qij (= 180-t) can have all values   mean square end-to-end distance average end-to-end distance now C = 1 C 4 – 10 Experiments for different polymers …

  14. 2) The freely rotating chain i.e. bond angle t is fixed but torsion angle f [0, 360] can have any value. Carbon-carbon bond angle  110o . . . summation can be performed over single variable (k) by

  15. Geometrical series sum On the other hnd Differentiate previous Multibly by x

  16. infinitely long chains (n=) if t=110o freely rotating model gives C 2, for polyethylene chain good approximation at high T when T,G, and G’states are almost ”equally” populated. At low T trans is more populated and chain conformation is more extended

  17. 3) The hindered rotation model i.e. bond angle t is fixed and also torsion angle f can only have three values T, G, G’. Relative population of T, G and G’ states depends on the energy levels (figure) and they are temperature dependent Again we can use same equation: but this case it means a lot of work … see Example Gedde pages 26-27 .. result First term is the freely rotation result and second term is the correction due to hindered rotation is the average value for cosf, where f is the torsion angle. And it is temperature dependend

  18. i = 1 i =2 i = 3 Averages in statistical mechanics Now we have a system which have a fixed number of states (3: G, T, and G’). System partition functionZ measures the number of different states the system can adopt at the tremperature of interest At T = 0 this equals 1 and it increases with increasing temperature How to calculate average values? Take any parameter f, which takes a value fi for the state i. Now for polyethylene 3 states: i = 1 (Gauche) f1= -120, E1 = Eg i = 2 (Trans) f2= 0 E2 = E t=0 i = 3 (Gauhe’) f3 = 120, E3 = Eg Average

  19. Average for cos(f), polyethylene where For hindered rotation square end-to-end average For example polyethylene at 140 oC, Et =0 and Eg 2.1, Note that in this case the constant C is higher than freely rotating model- hindered rotation includes some rigidity to the chain.. but still less than experimentally found C = 6.7 for polyethylene

  20. 4) The chains with interdependent bonds: statistical weight matrices i.e. bond angle t is fixed and also torsion angle f can only have three values T, G, G’. And potential energy of a given bond i depends on the states of the adjacent bonds i-1 and i+1 The conformation of n bond each having three possible torsion angles may specified by n-2 componenets. For example heptane 7 bonds: one possible conformation TGTGG’ Total conformation energy

  21. The chains with interdependent bonds …average square end-to-end distance …

  22. Random flight analyzis – The Gaussian Chain Previous models for chain conformation predicts quite well the polymer chain end-to-end distance scaling But they does not lead any further analysis – for example what is the distribution of end-to-end distances r ? Statistical problem - What is the propability that the chain displacement vector reaches from origin to the point r and lies within the volume element dV=dxdydz ? Similar random process problems - Brownian particles

  23. Also similar random process problem – rifle shots on a target

  24. The function which models random processes is the Gaussian function The probability that polymer end-to-end lenght lying between x and x+dx is the product of p(x) and dx 1D correspondingly in 3D The probability that chain end-to-end lenght lies between r and r+dr is the product of P(r) and dV (4pr2 is the area of the sphere)

  25. Mean square value of r ? definite integral from mathematics tables now n = 2 and a = 1/r2 And from random freely jointed chain

  26. -Chains with preferred conformations • Crystallization • Liquid crystals or stiff chains • helices Crystallization: High density polyethylene HDPE

  27. poly(tetrafluoroethylene) (PTFE) If hydrogen atoms (from PE) are replaced by fluorine atoms with van der Waals diameter 270 pm – to accommodate the fluorine atoms a rotation around each C-C bond of about 20o is induced. This is accompanied by a slight opening of the C-C chain bond angle to about 116o 13:1 helix

  28. Vinyl polymers: example Isotactic PP (i-PP)

  29. Dense Polymer Systems: Entanglements Given the red polymer with N monomers, we call N’ the number of monomers in between two entanglements How can we sketch a melt of polymers ? In a polymer melt where N>>N’, a chain will see N/N’ obstacles or entanglements . It is the number of entanglements (or N/N’) which rules motion of macromolecules in melt. We now aim at describing a theory which captures sufficient details of a polymer motion, but with a picture as simple as possible: Problems should be made as simple as possible….but not any simpler !!! (A. Einstein) From Mezzenga lecture

  30. Reptation Model (in simple linear chains) Suppose to Sketch a chain in a melt of chainsconstrainedwithin obstacles O1, O2. These obstacles represent the entanglements, and the chainis not allowed to cross them. How can the chain move withinthis network ? The obstacles are fixed. The chaincanonly move tangentially to itscountour, since transversal motion isimpeeded. The chain moves as a snake, a reptile and the movementiscalledreptation (afterDeGennes) From Mezzenga lecture

  31. From Rubinstein talk

  32. From Rubinstein talk

  33. Diffusion of Branched Chains Westudynow the diffusion of branchedchains. Letsstartwith a chainwith 1 side group having Nsmonomers. The motion of the main redchainsisidentical as before. However, the mobility of J, the monomer to which the sidechainisattachedis not longer μ1 but μ2 If N2 monomers now carry a side chain with having Ns monomers (and N1 are free) we can work out the total force f to apply to the chain to have a contour velocity v: f=v(N1μ1-1 + N2μ2-1) In order to be mobile a branch unit with Ns monomers needs to refold back. If z is the coordination of the lattice, this may happen with zNs possibilities. The probability for the branch chain to get back to the branch starting point is then P≈e-αNs with α≈1. Thus we can write μ2=μ1 e-αNs andf=vμ1-1(N1+ N2 eαNs ). The effect of branching is exponential. Suppose N2=1. τis dominated by branching as soon as Ns>1/α*ln(N1) From Mezzenga lecture

  34. From Rubinstein talk

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